Genomic Research Laboratory
Group of Prof. J. Schrenzel
Service of Infectious Diseases
Geneva University Hospitals (HUG)
CH-1211 Geneva 4, Switzerland

Home Research Microarray Software Publications Media Teaching Contacts


Genomics Platform

For scanning microarray slides we are currently using an Agilent Microarray Scanner, microarray images are then analyzed and data extracted using Feature Extraction. Microarray data are analyzed using the Partek Genomics Suite.

Other resources include:

  1. BioAnalyzer (Agilent): Lab-on-a-chip platform providing improved accuracy and reproducibility analysis of DNA, RNA, proteins and cells.
  2. NanoDrop: Spectrophotometer for highly accurate analyses of 1 microliter samples of nucleic acids.
  3. Sequence Detection System (SDS) TaqMan 7700 and TaqMan 7500 (Applied Biosystems): 96-wells plate real-time PCR instruments.
  4. StepOne (Applied Biosystems): 48-wells real-time PCR instrument.
  5. SmartCyclers (Cepheid): Random access real-time PCR instruments.
  6. Microlab Duo (Hamilton): Pipetting robot.
  7. Genios (Tecan): Multi-detection microplate reader for DNA quantification (Fluorescence, Absorbance or Luminescence).
  8. Clondiag ATR 01: Array Tube Reader.
  9. Agilent G2539: High resolution microarray scanner.
  10. ABI 3130xl: Automated 16 capillaries DNA sequencer.
  11. Illumina-Solexa Genome Analyzer II: high-throughput sequencer.
  12. Bioflux 1000: Automated microscopy workstation for time-lapse study of biofilm development under tightly controlled conditions of flow, temperature and incubation atmosphere.

Agilent Microarray Scanner Genios microplate reader NanoDrop
Microlab Duo Pipetting robot Agilent BioAnalyzer TaqMan 7700
Applied Biosystems 3130xl Sequencer Clondiag ATR 01 Applied Biosystems StepOne
BioFlux 1000 Illumina-Solexa Genome Analyzer II  

Related links
  Lab Introduction
  S. aureus
  Agilent Technologies
  Applied Biosystems
  In House Developed Software
  Feature Extraction

Revised Jun 23, 2009 - © 2003-2023 Genomic Research Laboratory, Geneva